Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fam78aQ8C552 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fam78aQ8C552 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fam78aQ8C552 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fam78aQ8C552 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fam78aQ8C552 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Fam78aQ8C552 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fam78aQ8C552 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fam78aQ8C552 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.88■□□□□ 0.77
Fam78aQ8C552 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.88■□□□□ 0.77
Fam78aQ8C552 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Fam78aQ8C552 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Fam78aQ8C552 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam78aQ8C552 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam78aQ8C552 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam78aQ8C552 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam78aQ8C552 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam78aQ8C552 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam78aQ8C552 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam78aQ8C552 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Fam78aQ8C552 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.87■□□□□ 0.77
Fam78aQ8C552 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.87■□□□□ 0.77
Fam78aQ8C552 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam78aQ8C552 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam78aQ8C552 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fam78aQ8C552 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Fam78aQ8C552 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Fam78aQ8C552 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.86■□□□□ 0.77
Fam78aQ8C552 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.86■□□□□ 0.77
Fam78aQ8C552 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Fam78aQ8C552 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.86■□□□□ 0.77
Fam78aQ8C552 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.86■□□□□ 0.77
Fam78aQ8C552 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fam78aQ8C552 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Fam78aQ8C552 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fam78aQ8C552 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fam78aQ8C552 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fam78aQ8C552 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fam78aQ8C552 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fam78aQ8C552 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fam78aQ8C552 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fam78aQ8C552 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Fam78aQ8C552 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fam78aQ8C552 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fam78aQ8C552 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Fam78aQ8C552 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fam78aQ8C552 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fam78aQ8C552 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fam78aQ8C552 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fam78aQ8C552 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.84■□□□□ 0.77
Fam78aQ8C552 Gm13158-201ENSMUST00000122007 736 ntBASIC19.84■□□□□ 0.77
Fam78aQ8C552 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.84■□□□□ 0.77
Fam78aQ8C552 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Fam78aQ8C552 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fam78aQ8C552 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fam78aQ8C552 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.83■□□□□ 0.77
Fam78aQ8C552 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fam78aQ8C552 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.83■□□□□ 0.77
Fam78aQ8C552 Gm715-201ENSMUST00000117865 831 ntBASIC19.83■□□□□ 0.77
Fam78aQ8C552 Gm15378-201ENSMUST00000121894 207 ntBASIC19.83■□□□□ 0.77
Fam78aQ8C552 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.83■□□□□ 0.77
Fam78aQ8C552 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.83■□□□□ 0.77
Fam78aQ8C552 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.83■□□□□ 0.77
Fam78aQ8C552 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Fam78aQ8C552 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fam78aQ8C552 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fam78aQ8C552 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fam78aQ8C552 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fam78aQ8C552 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fam78aQ8C552 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fam78aQ8C552 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fam78aQ8C552 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fam78aQ8C552 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Fam78aQ8C552 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Fam78aQ8C552 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fam78aQ8C552 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms