Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC23.86■■□□□ 1.41
Ccdc60Q8C4J0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc60Q8C4J0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc60Q8C4J0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Ccdc60Q8C4J0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Gm15853-202ENSMUST00000195518 2041 ntBASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Gm9885-202ENSMUST00000186234 2209 ntBASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Ccdc60Q8C4J0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC23.83■■□□□ 1.41
Ccdc60Q8C4J0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc60Q8C4J0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc60Q8C4J0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc60Q8C4J0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc60Q8C4J0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc60Q8C4J0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc60Q8C4J0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Ccdc60Q8C4J0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ccdc60Q8C4J0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ccdc60Q8C4J0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Ccdc60Q8C4J0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc60Q8C4J0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Ccdc60Q8C4J0 Gm38342-201ENSMUST00000195710 2980 ntBASIC23.82■■□□□ 1.4
Ccdc60Q8C4J0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc60Q8C4J0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc60Q8C4J0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc60Q8C4J0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc60Q8C4J0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc60Q8C4J0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc60Q8C4J0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc60Q8C4J0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc60Q8C4J0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc60Q8C4J0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc60Q8C4J0 Gm43231-201ENSMUST00000202960 2258 ntBASIC23.81■■□□□ 1.4
Ccdc60Q8C4J0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc60Q8C4J0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc60Q8C4J0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc60Q8C4J0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc60Q8C4J0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc60Q8C4J0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc60Q8C4J0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Ccdc60Q8C4J0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc60Q8C4J0 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.8■■□□□ 1.4
Ccdc60Q8C4J0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC23.8■■□□□ 1.4
Ccdc60Q8C4J0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc60Q8C4J0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC23.8■■□□□ 1.4
Ccdc60Q8C4J0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc60Q8C4J0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc60Q8C4J0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc60Q8C4J0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc60Q8C4J0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc60Q8C4J0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc60Q8C4J0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc60Q8C4J0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
Ccdc60Q8C4J0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc60Q8C4J0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Ccdc60Q8C4J0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc60Q8C4J0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc60Q8C4J0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Ccdc60Q8C4J0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms