Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Usp44Q8C2S0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Usp44Q8C2S0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Usp44Q8C2S0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.97■■□□□ 1.11
Usp44Q8C2S0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.97■■□□□ 1.11
Usp44Q8C2S0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Usp44Q8C2S0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Usp44Q8C2S0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Usp44Q8C2S0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Usp44Q8C2S0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Usp44Q8C2S0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Usp44Q8C2S0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Usp44Q8C2S0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Usp44Q8C2S0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Usp44Q8C2S0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.96■■□□□ 1.11
Usp44Q8C2S0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Usp44Q8C2S0 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.96■■□□□ 1.11
Usp44Q8C2S0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Usp44Q8C2S0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Usp44Q8C2S0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp44Q8C2S0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp44Q8C2S0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp44Q8C2S0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.95■■□□□ 1.1
Usp44Q8C2S0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp44Q8C2S0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Usp44Q8C2S0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Usp44Q8C2S0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Usp44Q8C2S0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Usp44Q8C2S0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp44Q8C2S0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.94■■□□□ 1.1
Usp44Q8C2S0 Gm7291-201ENSMUST00000199147 382 ntBASIC21.94■■□□□ 1.1
Usp44Q8C2S0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
Usp44Q8C2S0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Usp44Q8C2S0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp44Q8C2S0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Usp44Q8C2S0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Usp44Q8C2S0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp44Q8C2S0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp44Q8C2S0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Usp44Q8C2S0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp44Q8C2S0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Usp44Q8C2S0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.93■■□□□ 1.1
Usp44Q8C2S0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.93■■□□□ 1.1
Usp44Q8C2S0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.93■■□□□ 1.1
Usp44Q8C2S0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp44Q8C2S0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
Usp44Q8C2S0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp44Q8C2S0 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.92■■□□□ 1.1
Usp44Q8C2S0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp44Q8C2S0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp44Q8C2S0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp44Q8C2S0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp44Q8C2S0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Usp44Q8C2S0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp44Q8C2S0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.91■■□□□ 1.1
Usp44Q8C2S0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Usp44Q8C2S0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Usp44Q8C2S0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp44Q8C2S0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp44Q8C2S0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp44Q8C2S0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp44Q8C2S0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Usp44Q8C2S0 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.89■■□□□ 1.1
Usp44Q8C2S0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
Usp44Q8C2S0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Usp44Q8C2S0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Usp44Q8C2S0 Gm37179-201ENSMUST00000194862 823 ntBASIC21.89■■□□□ 1.09
Usp44Q8C2S0 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.89■■□□□ 1.09
Usp44Q8C2S0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.89■■□□□ 1.09
Usp44Q8C2S0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Usp44Q8C2S0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Usp44Q8C2S0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Usp44Q8C2S0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Usp44Q8C2S0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.89■■□□□ 1.09
Usp44Q8C2S0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Usp44Q8C2S0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Usp44Q8C2S0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Usp44Q8C2S0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms