Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chd9Q8BYH8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Chd9Q8BYH8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Gm8587-201ENSMUST00000076538 843 ntBASIC14.83□□□□□ -0.04
Chd9Q8BYH8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chd9Q8BYH8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 AA386476-201ENSMUST00000098781 1665 ntBASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd9Q8BYH8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Chd9Q8BYH8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd9Q8BYH8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd9Q8BYH8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms