Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.54■□□□□ 0.72
Trerf1Q8BXJ2 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.54■□□□□ 0.72
Trerf1Q8BXJ2 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.54■□□□□ 0.72
Trerf1Q8BXJ2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trerf1Q8BXJ2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trerf1Q8BXJ2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trerf1Q8BXJ2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.54■□□□□ 0.72
Trerf1Q8BXJ2 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.54■□□□□ 0.72
Trerf1Q8BXJ2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Gm9988-201ENSMUST00000069786 435 ntBASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trerf1Q8BXJ2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Gm42642-201ENSMUST00000200683 355 ntBASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trerf1Q8BXJ2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trerf1Q8BXJ2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Trerf1Q8BXJ2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
Trerf1Q8BXJ2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trerf1Q8BXJ2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trerf1Q8BXJ2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trerf1Q8BXJ2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trerf1Q8BXJ2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trerf1Q8BXJ2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trerf1Q8BXJ2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trerf1Q8BXJ2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trerf1Q8BXJ2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trerf1Q8BXJ2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms