Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Cc2d1bQ8BRN9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Gm38205-201ENSMUST00000192243 258 ntBASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cc2d1bQ8BRN9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Cc2d1bQ8BRN9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cc2d1bQ8BRN9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Cc2d1bQ8BRN9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cc2d1bQ8BRN9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cc2d1bQ8BRN9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cc2d1bQ8BRN9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cc2d1bQ8BRN9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cc2d1bQ8BRN9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.64■□□□□ 0.89
Cc2d1bQ8BRN9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cc2d1bQ8BRN9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cc2d1bQ8BRN9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cc2d1bQ8BRN9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cc2d1bQ8BRN9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cc2d1bQ8BRN9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cc2d1bQ8BRN9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cc2d1bQ8BRN9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cc2d1bQ8BRN9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cc2d1bQ8BRN9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.61■□□□□ 0.89
Cc2d1bQ8BRN9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms