Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap4Q8BMK4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ckap4Q8BMK4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ckap4Q8BMK4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ckap4Q8BMK4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ckap4Q8BMK4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ckap4Q8BMK4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap4Q8BMK4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap4Q8BMK4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Ckap4Q8BMK4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap4Q8BMK4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap4Q8BMK4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap4Q8BMK4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap4Q8BMK4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap4Q8BMK4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.64■□□□□ 0.41
Ckap4Q8BMK4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap4Q8BMK4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.63■□□□□ 0.41
Ckap4Q8BMK4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Serp2-204ENSMUST00000228055 705 ntBASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap4Q8BMK4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ckap4Q8BMK4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Gm11421-201ENSMUST00000122124 294 ntBASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Gm6139-201ENSMUST00000079261 882 ntBASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms