Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcal1Q8BJL0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 Gm715-201ENSMUST00000117865 831 ntBASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcal1Q8BJL0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Gm22325-201ENSMUST00000158904 308 ntBASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Smarcal1Q8BJL0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Flg-201ENSMUST00000050758 1488 ntBASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Mir1199-201ENSMUST00000117015 119 ntBASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcal1Q8BJL0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 Gm7977-201ENSMUST00000193787 748 ntBASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcal1Q8BJL0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcal1Q8BJL0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcal1Q8BJL0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcal1Q8BJL0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcal1Q8BJL0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcal1Q8BJL0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcal1Q8BJL0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.85■□□□□ 0.77
Smarcal1Q8BJL0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.85■□□□□ 0.77
Smarcal1Q8BJL0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcal1Q8BJL0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcal1Q8BJL0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Smarcal1Q8BJL0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms