Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Gm22325-201ENSMUST00000158904 308 ntBASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tdp1Q8BJ37 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tdp1Q8BJ37 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tdp1Q8BJ37 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tdp1Q8BJ37 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tdp1Q8BJ37 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tdp1Q8BJ37 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tdp1Q8BJ37 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tdp1Q8BJ37 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.65■□□□□ 0.9
Tdp1Q8BJ37 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.65■□□□□ 0.9
Tdp1Q8BJ37 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tdp1Q8BJ37 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tdp1Q8BJ37 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp1Q8BJ37 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Gm11927-201ENSMUST00000118472 759 ntBASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tdp1Q8BJ37 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tdp1Q8BJ37 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 Mir1199-201ENSMUST00000117015 119 ntBASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 Gm7977-201ENSMUST00000193787 748 ntBASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 Flg-201ENSMUST00000050758 1488 ntBASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tdp1Q8BJ37 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms