Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.81■□□□□ 0.76
Trim6Q8BGE7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim6Q8BGE7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim6Q8BGE7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim6Q8BGE7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.81■□□□□ 0.76
Trim6Q8BGE7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim6Q8BGE7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim6Q8BGE7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim6Q8BGE7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim6Q8BGE7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim6Q8BGE7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim6Q8BGE7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim6Q8BGE7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim6Q8BGE7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim6Q8BGE7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim6Q8BGE7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim6Q8BGE7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim6Q8BGE7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim6Q8BGE7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim6Q8BGE7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim6Q8BGE7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim6Q8BGE7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim6Q8BGE7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim6Q8BGE7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim6Q8BGE7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Trim6Q8BGE7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim6Q8BGE7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim6Q8BGE7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim6Q8BGE7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Trim6Q8BGE7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim6Q8BGE7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim6Q8BGE7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.77■□□□□ 0.76
Trim6Q8BGE7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim6Q8BGE7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim6Q8BGE7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim6Q8BGE7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim6Q8BGE7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim6Q8BGE7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim6Q8BGE7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim6Q8BGE7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim6Q8BGE7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim6Q8BGE7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim6Q8BGE7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim6Q8BGE7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
Trim6Q8BGE7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim6Q8BGE7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim6Q8BGE7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim6Q8BGE7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim6Q8BGE7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim6Q8BGE7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim6Q8BGE7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 143.4 ms