Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubp1Q811S7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubp1Q811S7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ubp1Q811S7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ubp1Q811S7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubp1Q811S7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubp1Q811S7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.33■□□□□ 0.53
Ubp1Q811S7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubp1Q811S7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.33■□□□□ 0.52
Ubp1Q811S7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.33■□□□□ 0.52
Ubp1Q811S7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubp1Q811S7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubp1Q811S7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubp1Q811S7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubp1Q811S7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ubp1Q811S7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.32■□□□□ 0.52
Ubp1Q811S7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.32■□□□□ 0.52
Ubp1Q811S7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubp1Q811S7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.31■□□□□ 0.52
Ubp1Q811S7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms