Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim50Q810I2 Gm10033-202ENSMUST00000211874 928 ntBASIC18.2■□□□□ 0.5
Trim50Q810I2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.2■□□□□ 0.5
Trim50Q810I2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trim50Q810I2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim50Q810I2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim50Q810I2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trim50Q810I2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim50Q810I2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim50Q810I2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim50Q810I2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim50Q810I2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Trim50Q810I2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim50Q810I2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim50Q810I2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim50Q810I2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim50Q810I2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim50Q810I2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim50Q810I2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim50Q810I2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim50Q810I2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim50Q810I2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim50Q810I2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim50Q810I2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Trim50Q810I2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim50Q810I2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim50Q810I2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Trim50Q810I2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim50Q810I2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim50Q810I2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim50Q810I2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim50Q810I2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim50Q810I2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim50Q810I2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim50Q810I2 Gm13534-201ENSMUST00000121169 513 ntBASIC18.17■□□□□ 0.5
Trim50Q810I2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
Trim50Q810I2 Gm42642-201ENSMUST00000200683 355 ntBASIC18.17■□□□□ 0.5
Trim50Q810I2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim50Q810I2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim50Q810I2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim50Q810I2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim50Q810I2 BC021767-201ENSMUST00000126387 1716 ntBASIC18.17■□□□□ 0.5
Trim50Q810I2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim50Q810I2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim50Q810I2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim50Q810I2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim50Q810I2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim50Q810I2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Trim50Q810I2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.16■□□□□ 0.5
Trim50Q810I2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trim50Q810I2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.16■□□□□ 0.5
Trim50Q810I2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim50Q810I2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.15■□□□□ 0.5
Trim50Q810I2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim50Q810I2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim50Q810I2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
Trim50Q810I2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.15■□□□□ 0.5
Trim50Q810I2 Gm18671-201ENSMUST00000214826 683 ntBASIC18.15■□□□□ 0.5
Trim50Q810I2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim50Q810I2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim50Q810I2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim50Q810I2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim50Q810I2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim50Q810I2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trim50Q810I2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim50Q810I2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim50Q810I2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms