Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.23■□□□□ 0.99
Trnp1Q80ZI1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trnp1Q80ZI1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trnp1Q80ZI1 Gm6659-201ENSMUST00000174752 547 ntBASIC21.23■□□□□ 0.99
Trnp1Q80ZI1 Zfp783-201ENSMUST00000095946 670 ntBASIC21.23■□□□□ 0.99
Trnp1Q80ZI1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trnp1Q80ZI1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trnp1Q80ZI1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Gm11539-201ENSMUST00000119837 557 ntBASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Gm13436-201ENSMUST00000120418 567 ntBASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Gm10138-203ENSMUST00000206952 366 ntBASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Odf3b-204ENSMUST00000227834 930 ntBASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Trnp1Q80ZI1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trnp1Q80ZI1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trnp1Q80ZI1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.21■□□□□ 0.99
Trnp1Q80ZI1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.21■□□□□ 0.99
Trnp1Q80ZI1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Trnp1Q80ZI1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trnp1Q80ZI1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trnp1Q80ZI1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trnp1Q80ZI1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trnp1Q80ZI1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trnp1Q80ZI1 Gm18025-201ENSMUST00000221733 862 ntBASIC21.2■□□□□ 0.98
Trnp1Q80ZI1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trnp1Q80ZI1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trnp1Q80ZI1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Trnp1Q80ZI1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.2■□□□□ 0.98
Trnp1Q80ZI1 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.2■□□□□ 0.98
Trnp1Q80ZI1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trnp1Q80ZI1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trnp1Q80ZI1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.2■□□□□ 0.98
Trnp1Q80ZI1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnp1Q80ZI1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnp1Q80ZI1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trnp1Q80ZI1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnp1Q80ZI1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnp1Q80ZI1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trnp1Q80ZI1 Gm7367-201ENSMUST00000057611 492 ntBASIC21.18■□□□□ 0.98
Trnp1Q80ZI1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnp1Q80ZI1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnp1Q80ZI1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnp1Q80ZI1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Trnp1Q80ZI1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnp1Q80ZI1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.17■□□□□ 0.98
Trnp1Q80ZI1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.17■□□□□ 0.98
Trnp1Q80ZI1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trnp1Q80ZI1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trnp1Q80ZI1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.17■□□□□ 0.98
Trnp1Q80ZI1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trnp1Q80ZI1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trnp1Q80ZI1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trnp1Q80ZI1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trnp1Q80ZI1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trnp1Q80ZI1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trnp1Q80ZI1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trnp1Q80ZI1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trnp1Q80ZI1 Gm7889-201ENSMUST00000185591 958 ntBASIC21.16■□□□□ 0.98
Trnp1Q80ZI1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trnp1Q80ZI1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trnp1Q80ZI1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trnp1Q80ZI1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Trnp1Q80ZI1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trnp1Q80ZI1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Gm15375-201ENSMUST00000119510 849 ntBASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Timm23-208ENSMUST00000226683 750 ntBASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms