Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Negr1Q80Z24 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Negr1Q80Z24 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.42■□□□□ 0.22
Negr1Q80Z24 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Negr1Q80Z24 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Negr1Q80Z24 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Negr1Q80Z24 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Negr1Q80Z24 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.42■□□□□ 0.22
Negr1Q80Z24 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Negr1Q80Z24 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Negr1Q80Z24 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Negr1Q80Z24 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Negr1Q80Z24 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Negr1Q80Z24 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.39■□□□□ 0.21
Negr1Q80Z24 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Negr1Q80Z24 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Negr1Q80Z24 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Negr1Q80Z24 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.39■□□□□ 0.21
Negr1Q80Z24 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Negr1Q80Z24 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Negr1Q80Z24 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Negr1Q80Z24 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Negr1Q80Z24 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Negr1Q80Z24 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.38■□□□□ 0.21
Negr1Q80Z24 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Gm13146-201ENSMUST00000118508 780 ntBASIC16.38■□□□□ 0.21
Negr1Q80Z24 Gm13234-201ENSMUST00000120010 747 ntBASIC16.38■□□□□ 0.21
Negr1Q80Z24 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Gm10493-201ENSMUST00000097270 612 ntBASIC16.38■□□□□ 0.21
Negr1Q80Z24 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Negr1Q80Z24 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.37■□□□□ 0.21
Negr1Q80Z24 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Negr1Q80Z24 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.37■□□□□ 0.21
Negr1Q80Z24 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.37■□□□□ 0.21
Negr1Q80Z24 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.37■□□□□ 0.21
Negr1Q80Z24 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Negr1Q80Z24 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Negr1Q80Z24 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Negr1Q80Z24 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Negr1Q80Z24 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Negr1Q80Z24 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Negr1Q80Z24 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Negr1Q80Z24 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.36■□□□□ 0.21
Negr1Q80Z24 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Negr1Q80Z24 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
Negr1Q80Z24 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Negr1Q80Z24 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Negr1Q80Z24 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Negr1Q80Z24 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Negr1Q80Z24 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Negr1Q80Z24 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Negr1Q80Z24 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Negr1Q80Z24 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms