Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nrde2Q80XC6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nrde2Q80XC6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.89■□□□□ 0.61
Nrde2Q80XC6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nrde2Q80XC6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nrde2Q80XC6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.89■□□□□ 0.61
Nrde2Q80XC6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nrde2Q80XC6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nrde2Q80XC6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nrde2Q80XC6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Gm12896-201ENSMUST00000118430 226 ntBASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.88■□□□□ 0.61
Nrde2Q80XC6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Gm27275-201ENSMUST00000184318 272 ntBASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Nrde2Q80XC6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.86■□□□□ 0.61
Nrde2Q80XC6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nrde2Q80XC6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nrde2Q80XC6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nrde2Q80XC6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.86■□□□□ 0.61
Nrde2Q80XC6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nrde2Q80XC6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nrde2Q80XC6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nrde2Q80XC6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nrde2Q80XC6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nrde2Q80XC6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Nrde2Q80XC6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nrde2Q80XC6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nrde2Q80XC6 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.85■□□□□ 0.61
Nrde2Q80XC6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nrde2Q80XC6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nrde2Q80XC6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nrde2Q80XC6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nrde2Q80XC6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nrde2Q80XC6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nrde2Q80XC6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nrde2Q80XC6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nrde2Q80XC6 Gm6576-201ENSMUST00000169678 883 ntBASIC18.84■□□□□ 0.61
Nrde2Q80XC6 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.84■□□□□ 0.61
Nrde2Q80XC6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nrde2Q80XC6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nrde2Q80XC6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nrde2Q80XC6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nrde2Q80XC6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms