Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc116Q80X53 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc116Q80X53 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc116Q80X53 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc116Q80X53 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc116Q80X53 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc116Q80X53 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ccdc116Q80X53 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccdc116Q80X53 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ccdc116Q80X53 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc116Q80X53 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc116Q80X53 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc116Q80X53 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.29■□□□□ 0.52
Ccdc116Q80X53 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc116Q80X53 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc116Q80X53 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.29■□□□□ 0.52
Ccdc116Q80X53 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc116Q80X53 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc116Q80X53 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc116Q80X53 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc116Q80X53 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc116Q80X53 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc116Q80X53 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Ccdc116Q80X53 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Reep4-203ENSMUST00000226563 1444 ntBASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc116Q80X53 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc116Q80X53 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.27■□□□□ 0.52
Ccdc116Q80X53 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc116Q80X53 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc116Q80X53 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc116Q80X53 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc116Q80X53 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc116Q80X53 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.27■□□□□ 0.52
Ccdc116Q80X53 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Ccdc116Q80X53 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc116Q80X53 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc116Q80X53 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc116Q80X53 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc116Q80X53 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc116Q80X53 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.26■□□□□ 0.51
Ccdc116Q80X53 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccdc116Q80X53 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc116Q80X53 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ccdc116Q80X53 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc116Q80X53 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc116Q80X53 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc116Q80X53 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc116Q80X53 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc116Q80X53 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Gm13146-201ENSMUST00000118508 780 ntBASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ccdc116Q80X53 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc116Q80X53 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc116Q80X53 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc116Q80X53 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc116Q80X53 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc116Q80X53 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ccdc116Q80X53 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc116Q80X53 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc116Q80X53 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ccdc116Q80X53 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc116Q80X53 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc116Q80X53 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc116Q80X53 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms