Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ush1gQ80T11 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.44■□□□□ 0.86
Ush1gQ80T11 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ush1gQ80T11 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ush1gQ80T11 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ush1gQ80T11 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ush1gQ80T11 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ush1gQ80T11 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ush1gQ80T11 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.43■□□□□ 0.86
Ush1gQ80T11 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
Ush1gQ80T11 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.43■□□□□ 0.86
Ush1gQ80T11 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ush1gQ80T11 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ush1gQ80T11 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ush1gQ80T11 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ush1gQ80T11 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ush1gQ80T11 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ush1gQ80T11 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ush1gQ80T11 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ush1gQ80T11 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ush1gQ80T11 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.42■□□□□ 0.86
Ush1gQ80T11 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ush1gQ80T11 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ush1gQ80T11 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ush1gQ80T11 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ush1gQ80T11 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ush1gQ80T11 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ush1gQ80T11 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ush1gQ80T11 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ush1gQ80T11 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ush1gQ80T11 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ush1gQ80T11 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Ush1gQ80T11 Notumos-201ENSMUST00000151998 2659 ntBASIC20.4■□□□□ 0.86
Ush1gQ80T11 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ush1gQ80T11 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ush1gQ80T11 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.4■□□□□ 0.86
Ush1gQ80T11 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.4■□□□□ 0.86
Ush1gQ80T11 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ush1gQ80T11 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ush1gQ80T11 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ush1gQ80T11 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.4■□□□□ 0.86
Ush1gQ80T11 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Ush1gQ80T11 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ush1gQ80T11 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ush1gQ80T11 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.39■□□□□ 0.85
Ush1gQ80T11 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Ush1gQ80T11 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ush1gQ80T11 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ush1gQ80T11 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ush1gQ80T11 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ush1gQ80T11 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ush1gQ80T11 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ush1gQ80T11 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ush1gQ80T11 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ush1gQ80T11 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ush1gQ80T11 Gm12896-201ENSMUST00000118430 226 ntBASIC20.38■□□□□ 0.85
Ush1gQ80T11 Gm27275-201ENSMUST00000184318 272 ntBASIC20.38■□□□□ 0.85
Ush1gQ80T11 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ush1gQ80T11 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ush1gQ80T11 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.38■□□□□ 0.85
Ush1gQ80T11 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ush1gQ80T11 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ush1gQ80T11 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ush1gQ80T11 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ush1gQ80T11 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ush1gQ80T11 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ush1gQ80T11 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ush1gQ80T11 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ush1gQ80T11 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ush1gQ80T11 Gm6576-201ENSMUST00000169678 883 ntBASIC20.37■□□□□ 0.85
Ush1gQ80T11 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Ush1gQ80T11 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Ush1gQ80T11 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ush1gQ80T11 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.36■□□□□ 0.85
Ush1gQ80T11 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.36■□□□□ 0.85
Ush1gQ80T11 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ush1gQ80T11 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Ush1gQ80T11 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.36■□□□□ 0.85
Ush1gQ80T11 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ush1gQ80T11 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ush1gQ80T11 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ush1gQ80T11 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.36■□□□□ 0.85
Ush1gQ80T11 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ush1gQ80T11 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ush1gQ80T11 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ush1gQ80T11 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.35■□□□□ 0.85
Ush1gQ80T11 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ush1gQ80T11 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ush1gQ80T11 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms