Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Gm26524-201ENSMUST00000192339 390 ntBASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38bQ80SY5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Prpf38bQ80SY5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38bQ80SY5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.44■□□□□ 0.7
Prpf38bQ80SY5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.44■□□□□ 0.7
Prpf38bQ80SY5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38bQ80SY5 Rarb-207ENSMUST00000225921 2756 ntBASIC19.44■□□□□ 0.7
Prpf38bQ80SY5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38bQ80SY5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38bQ80SY5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Prpf38bQ80SY5 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.44■□□□□ 0.7
Prpf38bQ80SY5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38bQ80SY5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38bQ80SY5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Prpf38bQ80SY5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38bQ80SY5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38bQ80SY5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Prpf38bQ80SY5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.43■□□□□ 0.7
Prpf38bQ80SY5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.43■□□□□ 0.7
Prpf38bQ80SY5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38bQ80SY5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Gm5643-201ENSMUST00000117081 966 ntBASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38bQ80SY5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Rab3c-203ENSMUST00000224180 967 ntBASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf38bQ80SY5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38bQ80SY5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38bQ80SY5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38bQ80SY5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38bQ80SY5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38bQ80SY5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38bQ80SY5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38bQ80SY5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38bQ80SY5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38bQ80SY5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf38bQ80SY5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf38bQ80SY5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.39■□□□□ 0.7
Prpf38bQ80SY5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38bQ80SY5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Prpf38bQ80SY5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38bQ80SY5 Gm15565-201ENSMUST00000118890 427 ntBASIC19.38■□□□□ 0.69
Prpf38bQ80SY5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Prpf38bQ80SY5 Gm6420-201ENSMUST00000193885 723 ntBASIC19.38■□□□□ 0.69
Prpf38bQ80SY5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.38■□□□□ 0.69
Prpf38bQ80SY5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.38■□□□□ 0.69
Prpf38bQ80SY5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.38■□□□□ 0.69
Prpf38bQ80SY5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38bQ80SY5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38bQ80SY5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38bQ80SY5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38bQ80SY5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38bQ80SY5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38bQ80SY5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38bQ80SY5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms