Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ubfd1Q78JW9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ubfd1Q78JW9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubfd1Q78JW9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ubfd1Q78JW9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Ubfd1Q78JW9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ubfd1Q78JW9 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubfd1Q78JW9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubfd1Q78JW9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubfd1Q78JW9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Gm8520-201ENSMUST00000186517 868 ntBASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubfd1Q78JW9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 Gm37856-201ENSMUST00000191634 999 ntBASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubfd1Q78JW9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 Gm44549-201ENSMUST00000208351 577 ntBASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubfd1Q78JW9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ubfd1Q78JW9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Ubfd1Q78JW9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ubfd1Q78JW9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubfd1Q78JW9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubfd1Q78JW9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ubfd1Q78JW9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ubfd1Q78JW9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubfd1Q78JW9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms