Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.29■□□□□ 0.68
Cspg5Q71M36 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cspg5Q71M36 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg5Q71M36 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg5Q71M36 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg5Q71M36 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg5Q71M36 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cspg5Q71M36 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg5Q71M36 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Cspg5Q71M36 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.28■□□□□ 0.68
Cspg5Q71M36 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.28■□□□□ 0.68
Cspg5Q71M36 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.28■□□□□ 0.68
Cspg5Q71M36 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.28■□□□□ 0.68
Cspg5Q71M36 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg5Q71M36 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg5Q71M36 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.28■□□□□ 0.68
Cspg5Q71M36 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cspg5Q71M36 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg5Q71M36 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg5Q71M36 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg5Q71M36 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg5Q71M36 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg5Q71M36 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg5Q71M36 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.27■□□□□ 0.68
Cspg5Q71M36 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg5Q71M36 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg5Q71M36 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg5Q71M36 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg5Q71M36 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cspg5Q71M36 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cspg5Q71M36 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cspg5Q71M36 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cspg5Q71M36 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Cspg5Q71M36 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg5Q71M36 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.26■□□□□ 0.67
Cspg5Q71M36 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg5Q71M36 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg5Q71M36 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg5Q71M36 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg5Q71M36 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg5Q71M36 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Cspg5Q71M36 AA386476-201ENSMUST00000098781 1665 ntBASIC19.25■□□□□ 0.67
Cspg5Q71M36 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Gm13534-201ENSMUST00000121169 513 ntBASIC19.25■□□□□ 0.67
Cspg5Q71M36 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.25■□□□□ 0.67
Cspg5Q71M36 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cspg5Q71M36 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg5Q71M36 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cspg5Q71M36 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.24■□□□□ 0.67
Cspg5Q71M36 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.24■□□□□ 0.67
Cspg5Q71M36 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg5Q71M36 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg5Q71M36 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg5Q71M36 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg5Q71M36 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.23■□□□□ 0.67
Cspg5Q71M36 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.23■□□□□ 0.67
Cspg5Q71M36 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cspg5Q71M36 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cspg5Q71M36 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Cspg5Q71M36 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cspg5Q71M36 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cspg5Q71M36 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.23■□□□□ 0.67
Cspg5Q71M36 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cspg5Q71M36 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.23■□□□□ 0.67
Cspg5Q71M36 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg5Q71M36 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.22■□□□□ 0.67
Cspg5Q71M36 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cspg5Q71M36 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg5Q71M36 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.21■□□□□ 0.67
Cspg5Q71M36 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.21■□□□□ 0.67
Cspg5Q71M36 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms