Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Gm11643-201ENSMUST00000119578 864 ntBASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Syne1Q6ZWR6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Syne1Q6ZWR6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Syne1Q6ZWR6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC6.34□□□□□ -1.4
Syne1Q6ZWR6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Syne1Q6ZWR6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC6.34□□□□□ -1.4
Syne1Q6ZWR6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.4
Syne1Q6ZWR6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Syne1Q6ZWR6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Syne1Q6ZWR6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Syne1Q6ZWR6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Gm6576-201ENSMUST00000169678 883 ntBASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Gm20472-201ENSMUST00000174403 1240 ntBASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Arhgef33-211ENSMUST00000225658 473 ntBASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne1Q6ZWR6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms