Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Kdm1aQ6ZQ88 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Kdm1aQ6ZQ88 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
Kdm1aQ6ZQ88 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kdm1aQ6ZQ88 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Kdm1aQ6ZQ88 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Kdm1aQ6ZQ88 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.64■□□□□ 0.89
Kdm1aQ6ZQ88 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.64■□□□□ 0.89
Kdm1aQ6ZQ88 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.64■□□□□ 0.89
Kdm1aQ6ZQ88 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Kdm1aQ6ZQ88 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Kdm1aQ6ZQ88 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Kdm1aQ6ZQ88 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.64■□□□□ 0.89
Kdm1aQ6ZQ88 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Kdm1aQ6ZQ88 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Kdm1aQ6ZQ88 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm1aQ6ZQ88 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm1aQ6ZQ88 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Kdm1aQ6ZQ88 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm1aQ6ZQ88 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.61■□□□□ 0.89
Kdm1aQ6ZQ88 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm1aQ6ZQ88 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Kdm1aQ6ZQ88 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Kdm1aQ6ZQ88 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm1aQ6ZQ88 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm1aQ6ZQ88 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Kdm1aQ6ZQ88 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm1aQ6ZQ88 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm1aQ6ZQ88 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm1aQ6ZQ88 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm1aQ6ZQ88 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm1aQ6ZQ88 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm1aQ6ZQ88 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm1aQ6ZQ88 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm1aQ6ZQ88 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Kdm1aQ6ZQ88 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm1aQ6ZQ88 Gm9988-201ENSMUST00000069786 435 ntBASIC20.58■□□□□ 0.89
Kdm1aQ6ZQ88 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm1aQ6ZQ88 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Kdm1aQ6ZQ88 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm1aQ6ZQ88 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms