Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rad54bQ6PFE3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Gm12821-201ENSMUST00000120022 600 ntBASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rad54bQ6PFE3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rad54bQ6PFE3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rad54bQ6PFE3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rad54bQ6PFE3 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.77■□□□□ 0.6
Rad54bQ6PFE3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rad54bQ6PFE3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rad54bQ6PFE3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rad54bQ6PFE3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rad54bQ6PFE3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rad54bQ6PFE3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rad54bQ6PFE3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rad54bQ6PFE3 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.77■□□□□ 0.59
Rad54bQ6PFE3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.77■□□□□ 0.59
Rad54bQ6PFE3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Gm6139-201ENSMUST00000079261 882 ntBASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Rarb-207ENSMUST00000225921 2756 ntBASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rad54bQ6PFE3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Gm26833-201ENSMUST00000180899 440 ntBASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Gm27454-201ENSMUST00000185090 204 ntBASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rad54bQ6PFE3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rad54bQ6PFE3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.74■□□□□ 0.59
Rad54bQ6PFE3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.74■□□□□ 0.59
Rad54bQ6PFE3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rad54bQ6PFE3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rad54bQ6PFE3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.74■□□□□ 0.59
Rad54bQ6PFE3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rad54bQ6PFE3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rad54bQ6PFE3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rad54bQ6PFE3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rad54bQ6PFE3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rad54bQ6PFE3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms