Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac4Q6NZM9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac4Q6NZM9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
Hdac4Q6NZM9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac4Q6NZM9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac4Q6NZM9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac4Q6NZM9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac4Q6NZM9 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.94■□□□□ 0.94
Hdac4Q6NZM9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Hdac4Q6NZM9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.94■□□□□ 0.94
Hdac4Q6NZM9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac4Q6NZM9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.94■□□□□ 0.94
Hdac4Q6NZM9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Hdac4Q6NZM9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac4Q6NZM9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac4Q6NZM9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac4Q6NZM9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac4Q6NZM9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac4Q6NZM9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac4Q6NZM9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Hdac4Q6NZM9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac4Q6NZM9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac4Q6NZM9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Hdac4Q6NZM9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Gm42778-201ENSMUST00000199644 553 ntBASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Gm10033-202ENSMUST00000211874 928 ntBASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac4Q6NZM9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.89■□□□□ 0.94
Hdac4Q6NZM9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hdac4Q6NZM9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.89■□□□□ 0.94
Hdac4Q6NZM9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac4Q6NZM9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.89■□□□□ 0.93
Hdac4Q6NZM9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.89■□□□□ 0.93
Hdac4Q6NZM9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Hdac4Q6NZM9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac4Q6NZM9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.88■□□□□ 0.93
Hdac4Q6NZM9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Hdac4Q6NZM9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Hdac4Q6NZM9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac4Q6NZM9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac4Q6NZM9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.88■□□□□ 0.93
Hdac4Q6NZM9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac4Q6NZM9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac4Q6NZM9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac4Q6NZM9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac4Q6NZM9 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.86■□□□□ 0.93
Hdac4Q6NZM9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.86■□□□□ 0.93
Hdac4Q6NZM9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac4Q6NZM9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac4Q6NZM9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac4Q6NZM9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.86■□□□□ 0.93
Hdac4Q6NZM9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.86■□□□□ 0.93
Hdac4Q6NZM9 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.86■□□□□ 0.93
Hdac4Q6NZM9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac4Q6NZM9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms