Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Foxn1Q61575 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Foxn1Q61575 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Foxn1Q61575 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Foxn1Q61575 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Foxn1Q61575 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Foxn1Q61575 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Foxn1Q61575 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Foxn1Q61575 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.41■■□□□ 1.02
Foxn1Q61575 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Foxn1Q61575 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.41■■□□□ 1.02
Foxn1Q61575 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Foxn1Q61575 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Foxn1Q61575 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Foxn1Q61575 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Foxn1Q61575 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxn1Q61575 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxn1Q61575 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Foxn1Q61575 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxn1Q61575 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxn1Q61575 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxn1Q61575 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxn1Q61575 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxn1Q61575 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Foxn1Q61575 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxn1Q61575 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxn1Q61575 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Foxn1Q61575 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Foxn1Q61575 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Foxn1Q61575 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Foxn1Q61575 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.39■■□□□ 1.01
Foxn1Q61575 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Foxn1Q61575 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Foxn1Q61575 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
Foxn1Q61575 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.38■■□□□ 1.01
Foxn1Q61575 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.38■■□□□ 1.01
Foxn1Q61575 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.38■■□□□ 1.01
Foxn1Q61575 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.38■■□□□ 1.01
Foxn1Q61575 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Foxn1Q61575 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Foxn1Q61575 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Foxn1Q61575 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Foxn1Q61575 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Foxn1Q61575 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Foxn1Q61575 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Foxn1Q61575 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.37■■□□□ 1.01
Foxn1Q61575 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Foxn1Q61575 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.37■■□□□ 1.01
Foxn1Q61575 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Foxn1Q61575 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Foxn1Q61575 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Foxn1Q61575 Gm3375-201ENSMUST00000203929 796 ntBASIC21.37■■□□□ 1.01
Foxn1Q61575 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.37■■□□□ 1.01
Foxn1Q61575 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxn1Q61575 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxn1Q61575 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxn1Q61575 Gm14859-201ENSMUST00000117752 357 ntBASIC21.36■■□□□ 1.01
Foxn1Q61575 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Foxn1Q61575 Timm23-208ENSMUST00000226683 750 ntBASIC21.36■■□□□ 1.01
Foxn1Q61575 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Foxn1Q61575 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Foxn1Q61575 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxn1Q61575 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxn1Q61575 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxn1Q61575 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxn1Q61575 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Foxn1Q61575 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxn1Q61575 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.36■■□□□ 1.01
Foxn1Q61575 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxn1Q61575 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxn1Q61575 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Foxn1Q61575 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.35■■□□□ 1.01
Foxn1Q61575 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxn1Q61575 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.35■■□□□ 1.01
Foxn1Q61575 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.35■■□□□ 1.01
Foxn1Q61575 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxn1Q61575 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxn1Q61575 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxn1Q61575 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxn1Q61575 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxn1Q61575 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxn1Q61575 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.34■■□□□ 1.01
Foxn1Q61575 Gm18959-201ENSMUST00000208954 655 ntBASIC21.34■■□□□ 1.01
Foxn1Q61575 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Foxn1Q61575 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.34■■□□□ 1.01
Foxn1Q61575 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxn1Q61575 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxn1Q61575 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Foxn1Q61575 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms