Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ecm1Q61508 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ecm1Q61508 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Ecm1Q61508 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ecm1Q61508 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ecm1Q61508 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ecm1Q61508 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Ecm1Q61508 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ecm1Q61508 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ecm1Q61508 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ecm1Q61508 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.82■□□□□ 0.92
Ecm1Q61508 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.82■□□□□ 0.92
Ecm1Q61508 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ecm1Q61508 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ecm1Q61508 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ecm1Q61508 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ecm1Q61508 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.82■□□□□ 0.92
Ecm1Q61508 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ecm1Q61508 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.81■□□□□ 0.92
Ecm1Q61508 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ecm1Q61508 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.81■□□□□ 0.92
Ecm1Q61508 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.81■□□□□ 0.92
Ecm1Q61508 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ecm1Q61508 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ecm1Q61508 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ecm1Q61508 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ecm1Q61508 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ecm1Q61508 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ecm1Q61508 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ecm1Q61508 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ecm1Q61508 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Ecm1Q61508 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ecm1Q61508 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ecm1Q61508 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ecm1Q61508 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Ecm1Q61508 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ecm1Q61508 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ecm1Q61508 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ecm1Q61508 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ecm1Q61508 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ecm1Q61508 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ecm1Q61508 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ecm1Q61508 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ecm1Q61508 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ecm1Q61508 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ecm1Q61508 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ecm1Q61508 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Ecm1Q61508 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ecm1Q61508 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ecm1Q61508 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ecm1Q61508 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ecm1Q61508 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ecm1Q61508 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ecm1Q61508 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ecm1Q61508 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ecm1Q61508 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ecm1Q61508 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ecm1Q61508 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ecm1Q61508 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ecm1Q61508 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ecm1Q61508 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ecm1Q61508 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ecm1Q61508 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ecm1Q61508 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Ecm1Q61508 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ecm1Q61508 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ecm1Q61508 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ecm1Q61508 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ecm1Q61508 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.78■□□□□ 0.92
Ecm1Q61508 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ecm1Q61508 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ecm1Q61508 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.77■□□□□ 0.92
Ecm1Q61508 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ecm1Q61508 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ecm1Q61508 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ecm1Q61508 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.77■□□□□ 0.92
Ecm1Q61508 Mir5122-201ENSMUST00000175004 89 ntBASIC20.77■□□□□ 0.92
Ecm1Q61508 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ecm1Q61508 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ecm1Q61508 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ecm1Q61508 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ecm1Q61508 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ecm1Q61508 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ecm1Q61508 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ecm1Q61508 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ecm1Q61508 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ecm1Q61508 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ecm1Q61508 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.76■□□□□ 0.91
Ecm1Q61508 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ecm1Q61508 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ecm1Q61508 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ecm1Q61508 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ecm1Q61508 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ecm1Q61508 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ecm1Q61508 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ecm1Q61508 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.75■□□□□ 0.91
Ecm1Q61508 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.75■□□□□ 0.91
Ecm1Q61508 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ecm1Q61508 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ecm1Q61508 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms