Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.26■□□□□ 0.51
Sim2Q61079 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sim2Q61079 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sim2Q61079 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sim2Q61079 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sim2Q61079 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sim2Q61079 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sim2Q61079 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sim2Q61079 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.25■□□□□ 0.51
Sim2Q61079 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sim2Q61079 Gm7367-201ENSMUST00000057611 492 ntBASIC18.25■□□□□ 0.51
Sim2Q61079 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sim2Q61079 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sim2Q61079 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sim2Q61079 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sim2Q61079 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sim2Q61079 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sim2Q61079 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sim2Q61079 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sim2Q61079 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sim2Q61079 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Sim2Q61079 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sim2Q61079 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sim2Q61079 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sim2Q61079 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sim2Q61079 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sim2Q61079 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.24■□□□□ 0.51
Sim2Q61079 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sim2Q61079 Flg-201ENSMUST00000050758 1488 ntBASIC18.24■□□□□ 0.51
Sim2Q61079 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sim2Q61079 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sim2Q61079 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sim2Q61079 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sim2Q61079 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sim2Q61079 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sim2Q61079 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sim2Q61079 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.23■□□□□ 0.51
Sim2Q61079 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.23■□□□□ 0.51
Sim2Q61079 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.23■□□□□ 0.51
Sim2Q61079 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Sim2Q61079 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sim2Q61079 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sim2Q61079 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.22■□□□□ 0.51
Sim2Q61079 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
Sim2Q61079 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.22■□□□□ 0.51
Sim2Q61079 Gm30025-201ENSMUST00000218555 728 ntBASIC18.22■□□□□ 0.51
Sim2Q61079 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sim2Q61079 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim2Q61079 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim2Q61079 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sim2Q61079 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim2Q61079 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Sim2Q61079 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.21■□□□□ 0.51
Sim2Q61079 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.21■□□□□ 0.51
Sim2Q61079 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Sim2Q61079 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.21■□□□□ 0.51
Sim2Q61079 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.21■□□□□ 0.51
Sim2Q61079 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim2Q61079 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.21■□□□□ 0.51
Sim2Q61079 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim2Q61079 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim2Q61079 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim2Q61079 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sim2Q61079 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sim2Q61079 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sim2Q61079 Gm11927-201ENSMUST00000118472 759 ntBASIC18.2■□□□□ 0.5
Sim2Q61079 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sim2Q61079 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sim2Q61079 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Sim2Q61079 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sim2Q61079 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sim2Q61079 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.2■□□□□ 0.5
Sim2Q61079 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sim2Q61079 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.2■□□□□ 0.5
Sim2Q61079 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.2■□□□□ 0.5
Sim2Q61079 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.2■□□□□ 0.5
Sim2Q61079 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sim2Q61079 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sim2Q61079 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim2Q61079 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim2Q61079 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim2Q61079 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim2Q61079 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Sim2Q61079 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sim2Q61079 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sim2Q61079 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.19■□□□□ 0.5
Sim2Q61079 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim2Q61079 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sim2Q61079 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms