Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd3Q61060 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd3Q61060 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd3Q61060 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd3Q61060 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd3Q61060 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Foxd3Q61060 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.09■□□□□ 0.33
Foxd3Q61060 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxd3Q61060 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Foxd3Q61060 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Foxd3Q61060 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.09■□□□□ 0.33
Foxd3Q61060 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd3Q61060 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.09■□□□□ 0.33
Foxd3Q61060 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Foxd3Q61060 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxd3Q61060 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Foxd3Q61060 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Foxd3Q61060 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxd3Q61060 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Foxd3Q61060 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Foxd3Q61060 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Foxd3Q61060 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.08■□□□□ 0.32
Foxd3Q61060 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxd3Q61060 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Foxd3Q61060 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxd3Q61060 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxd3Q61060 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxd3Q61060 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxd3Q61060 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxd3Q61060 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Foxd3Q61060 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxd3Q61060 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxd3Q61060 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.07■□□□□ 0.32
Foxd3Q61060 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.06■□□□□ 0.32
Foxd3Q61060 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxd3Q61060 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxd3Q61060 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Foxd3Q61060 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Foxd3Q61060 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.06■□□□□ 0.32
Foxd3Q61060 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxd3Q61060 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Foxd3Q61060 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Foxd3Q61060 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Foxd3Q61060 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxd3Q61060 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.05■□□□□ 0.32
Foxd3Q61060 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Foxd3Q61060 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Foxd3Q61060 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Foxd3Q61060 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Foxd3Q61060 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.05■□□□□ 0.32
Foxd3Q61060 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.05■□□□□ 0.32
Foxd3Q61060 Gm26833-201ENSMUST00000180899 440 ntBASIC17.05■□□□□ 0.32
Foxd3Q61060 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Foxd3Q61060 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.05■□□□□ 0.32
Foxd3Q61060 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Foxd3Q61060 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Foxd3Q61060 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd3Q61060 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd3Q61060 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd3Q61060 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd3Q61060 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd3Q61060 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Foxd3Q61060 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Foxd3Q61060 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Foxd3Q61060 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd3Q61060 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd3Q61060 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.04■□□□□ 0.32
Foxd3Q61060 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd3Q61060 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd3Q61060 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd3Q61060 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd3Q61060 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.03■□□□□ 0.32
Foxd3Q61060 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms