Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.38■□□□□ 0.69
Trim38Q5SZ99 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.37■□□□□ 0.69
Trim38Q5SZ99 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim38Q5SZ99 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim38Q5SZ99 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim38Q5SZ99 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Reep4-203ENSMUST00000226563 1444 ntBASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Gm13146-201ENSMUST00000118508 780 ntBASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim38Q5SZ99 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim38Q5SZ99 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim38Q5SZ99 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim38Q5SZ99 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Trim38Q5SZ99 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Trim38Q5SZ99 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Trim38Q5SZ99 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.33■□□□□ 0.68
Trim38Q5SZ99 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim38Q5SZ99 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim38Q5SZ99 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Trim38Q5SZ99 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
Trim38Q5SZ99 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim38Q5SZ99 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim38Q5SZ99 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim38Q5SZ99 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms