Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf43Q5NCP0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf43Q5NCP0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf43Q5NCP0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rnf43Q5NCP0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf43Q5NCP0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf43Q5NCP0 Gm43672-201ENSMUST00000199072 1731 ntBASIC19■□□□□ 0.63
Rnf43Q5NCP0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf43Q5NCP0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf43Q5NCP0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19■□□□□ 0.63
Rnf43Q5NCP0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Rnf43Q5NCP0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Gm2399-201ENSMUST00000104944 225 ntBASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Gm15378-201ENSMUST00000121894 207 ntBASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf43Q5NCP0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf43Q5NCP0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rnf43Q5NCP0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf43Q5NCP0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf43Q5NCP0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rnf43Q5NCP0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf43Q5NCP0 Mir1199-201ENSMUST00000117015 119 ntBASIC18.98■□□□□ 0.63
Rnf43Q5NCP0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf43Q5NCP0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.98■□□□□ 0.63
Rnf43Q5NCP0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf43Q5NCP0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf43Q5NCP0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf43Q5NCP0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rnf43Q5NCP0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf43Q5NCP0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.97■□□□□ 0.63
Rnf43Q5NCP0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.97■□□□□ 0.63
Rnf43Q5NCP0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf43Q5NCP0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf43Q5NCP0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf43Q5NCP0 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.97■□□□□ 0.63
Rnf43Q5NCP0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf43Q5NCP0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf43Q5NCP0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf43Q5NCP0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.96■□□□□ 0.63
Rnf43Q5NCP0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf43Q5NCP0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.96■□□□□ 0.63
Rnf43Q5NCP0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rnf43Q5NCP0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.96■□□□□ 0.63
Rnf43Q5NCP0 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.96■□□□□ 0.63
Rnf43Q5NCP0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.96■□□□□ 0.63
Rnf43Q5NCP0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Gm13158-201ENSMUST00000122007 736 ntBASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf43Q5NCP0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms