Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clhc1Q5M6W3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clhc1Q5M6W3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.99■□□□□ 0.47
Clhc1Q5M6W3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clhc1Q5M6W3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clhc1Q5M6W3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clhc1Q5M6W3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clhc1Q5M6W3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Clhc1Q5M6W3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Clhc1Q5M6W3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clhc1Q5M6W3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clhc1Q5M6W3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clhc1Q5M6W3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clhc1Q5M6W3 Gm21956-201ENSMUST00000179946 522 ntBASIC17.98■□□□□ 0.47
Clhc1Q5M6W3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.98■□□□□ 0.47
Clhc1Q5M6W3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.98■□□□□ 0.47
Clhc1Q5M6W3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clhc1Q5M6W3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.97■□□□□ 0.47
Clhc1Q5M6W3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clhc1Q5M6W3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clhc1Q5M6W3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clhc1Q5M6W3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.97■□□□□ 0.47
Clhc1Q5M6W3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.97■□□□□ 0.47
Clhc1Q5M6W3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clhc1Q5M6W3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Clhc1Q5M6W3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clhc1Q5M6W3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clhc1Q5M6W3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clhc1Q5M6W3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clhc1Q5M6W3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clhc1Q5M6W3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 AA386476-201ENSMUST00000098781 1665 ntBASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Clhc1Q5M6W3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms