Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.48■□□□□ 0.55
Scn2bQ56A07 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn2bQ56A07 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Scn2bQ56A07 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.47■□□□□ 0.55
Scn2bQ56A07 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn2bQ56A07 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn2bQ56A07 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.47■□□□□ 0.55
Scn2bQ56A07 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.47■□□□□ 0.55
Scn2bQ56A07 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn2bQ56A07 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Scn2bQ56A07 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn2bQ56A07 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn2bQ56A07 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Scn2bQ56A07 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn2bQ56A07 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Gm11421-201ENSMUST00000122124 294 ntBASIC18.46■□□□□ 0.55
Scn2bQ56A07 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.46■□□□□ 0.55
Scn2bQ56A07 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn2bQ56A07 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Scn2bQ56A07 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Scn2bQ56A07 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn2bQ56A07 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn2bQ56A07 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Scn2bQ56A07 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Gm43060-201ENSMUST00000200621 289 ntBASIC18.44■□□□□ 0.54
Scn2bQ56A07 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Gm40848-201ENSMUST00000221998 324 ntBASIC18.44■□□□□ 0.54
Scn2bQ56A07 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn2bQ56A07 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn2bQ56A07 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn2bQ56A07 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn2bQ56A07 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
Scn2bQ56A07 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn2bQ56A07 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn2bQ56A07 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.43■□□□□ 0.54
Scn2bQ56A07 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Scn2bQ56A07 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn2bQ56A07 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn2bQ56A07 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn2bQ56A07 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn2bQ56A07 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn2bQ56A07 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn2bQ56A07 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.42■□□□□ 0.54
Scn2bQ56A07 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Scn2bQ56A07 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.42■□□□□ 0.54
Scn2bQ56A07 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn2bQ56A07 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Scn2bQ56A07 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms