Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.86■■□□□ 1.09
Prpf38aQ4FK66 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.86■■□□□ 1.09
Prpf38aQ4FK66 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf38aQ4FK66 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf38aQ4FK66 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf38aQ4FK66 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf38aQ4FK66 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf38aQ4FK66 Trmt13-210ENSMUST00000198454 880 ntBASIC21.85■■□□□ 1.09
Prpf38aQ4FK66 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf38aQ4FK66 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Prpf38aQ4FK66 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Prpf38aQ4FK66 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf38aQ4FK66 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Gm12896-201ENSMUST00000118430 226 ntBASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Gm44549-201ENSMUST00000208351 577 ntBASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38aQ4FK66 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf38aQ4FK66 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf38aQ4FK66 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Prpf38aQ4FK66 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf38aQ4FK66 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.83■■□□□ 1.09
Prpf38aQ4FK66 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf38aQ4FK66 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.83■■□□□ 1.09
Prpf38aQ4FK66 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.83■■□□□ 1.09
Prpf38aQ4FK66 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.83■■□□□ 1.09
Prpf38aQ4FK66 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf38aQ4FK66 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Prpf38aQ4FK66 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Prpf38aQ4FK66 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Prpf38aQ4FK66 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Prpf38aQ4FK66 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Gm13168-201ENSMUST00000121771 632 ntBASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Gm2559-201ENSMUST00000201323 363 ntBASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38aQ4FK66 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf38aQ4FK66 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf38aQ4FK66 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf38aQ4FK66 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf38aQ4FK66 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf38aQ4FK66 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Prpf38aQ4FK66 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf38aQ4FK66 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf38aQ4FK66 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf38aQ4FK66 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf38aQ4FK66 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf38aQ4FK66 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.8■■□□□ 1.08
Prpf38aQ4FK66 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf38aQ4FK66 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf38aQ4FK66 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf38aQ4FK66 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf38aQ4FK66 Gm27275-201ENSMUST00000184318 272 ntBASIC21.79■■□□□ 1.08
Prpf38aQ4FK66 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf38aQ4FK66 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Prpf38aQ4FK66 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf38aQ4FK66 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf38aQ4FK66 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf38aQ4FK66 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Prpf38aQ4FK66 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.78■■□□□ 1.08
Prpf38aQ4FK66 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Prpf38aQ4FK66 Dio3-201ENSMUST00000097228 1449 ntBASIC21.78■■□□□ 1.08
Prpf38aQ4FK66 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Prpf38aQ4FK66 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf38aQ4FK66 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf38aQ4FK66 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf38aQ4FK66 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf38aQ4FK66 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf38aQ4FK66 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf38aQ4FK66 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf38aQ4FK66 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.77■■□□□ 1.08
Prpf38aQ4FK66 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf38aQ4FK66 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Prpf38aQ4FK66 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Prpf38aQ4FK66 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Prpf38aQ4FK66 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf38aQ4FK66 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf38aQ4FK66 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf38aQ4FK66 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf38aQ4FK66 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.76■■□□□ 1.07
Prpf38aQ4FK66 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf38aQ4FK66 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Prpf38aQ4FK66 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf38aQ4FK66 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38aQ4FK66 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38aQ4FK66 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms