Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.24■□□□□ 0.67
Trim80Q3V061 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim80Q3V061 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim80Q3V061 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim80Q3V061 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim80Q3V061 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim80Q3V061 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim80Q3V061 BC021767-201ENSMUST00000126387 1716 ntBASIC19.23■□□□□ 0.67
Trim80Q3V061 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim80Q3V061 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim80Q3V061 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim80Q3V061 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim80Q3V061 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim80Q3V061 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim80Q3V061 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim80Q3V061 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim80Q3V061 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim80Q3V061 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim80Q3V061 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim80Q3V061 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim80Q3V061 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim80Q3V061 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.22■□□□□ 0.67
Trim80Q3V061 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim80Q3V061 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
Trim80Q3V061 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim80Q3V061 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim80Q3V061 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim80Q3V061 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim80Q3V061 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim80Q3V061 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim80Q3V061 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim80Q3V061 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim80Q3V061 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim80Q3V061 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim80Q3V061 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim80Q3V061 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim80Q3V061 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim80Q3V061 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim80Q3V061 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.2■□□□□ 0.66
Trim80Q3V061 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim80Q3V061 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim80Q3V061 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim80Q3V061 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim80Q3V061 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim80Q3V061 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim80Q3V061 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim80Q3V061 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Trim80Q3V061 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Trim80Q3V061 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim80Q3V061 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim80Q3V061 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim80Q3V061 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim80Q3V061 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim80Q3V061 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim80Q3V061 Gm5874-201ENSMUST00000096101 508 ntBASIC19.19■□□□□ 0.66
Trim80Q3V061 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.19■□□□□ 0.66
Trim80Q3V061 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.19■□□□□ 0.66
Trim80Q3V061 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Trim80Q3V061 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim80Q3V061 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim80Q3V061 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim80Q3V061 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim80Q3V061 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim80Q3V061 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim80Q3V061 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim80Q3V061 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim80Q3V061 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim80Q3V061 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim80Q3V061 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim80Q3V061 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim80Q3V061 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim80Q3V061 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Trim80Q3V061 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim80Q3V061 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim80Q3V061 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim80Q3V061 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim80Q3V061 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim80Q3V061 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim80Q3V061 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim80Q3V061 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim80Q3V061 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim80Q3V061 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trim80Q3V061 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim80Q3V061 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim80Q3V061 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim80Q3V061 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms