Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pfdn4Q3UWL8 Grk6-206ENSMUST00000224995 2971 ntBASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn4Q3UWL8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn4Q3UWL8 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.23■□□□□ 0.51
Pfdn4Q3UWL8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.23■□□□□ 0.51
Pfdn4Q3UWL8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn4Q3UWL8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pfdn4Q3UWL8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn4Q3UWL8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn4Q3UWL8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.23■□□□□ 0.51
Pfdn4Q3UWL8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn4Q3UWL8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn4Q3UWL8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfdn4Q3UWL8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Pfdn4Q3UWL8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pfdn4Q3UWL8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfdn4Q3UWL8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.22■□□□□ 0.51
Pfdn4Q3UWL8 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.22■□□□□ 0.51
Pfdn4Q3UWL8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.22■□□□□ 0.51
Pfdn4Q3UWL8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pfdn4Q3UWL8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pfdn4Q3UWL8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfdn4Q3UWL8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pfdn4Q3UWL8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn4Q3UWL8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn4Q3UWL8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.21■□□□□ 0.51
Pfdn4Q3UWL8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.21■□□□□ 0.51
Pfdn4Q3UWL8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Pfdn4Q3UWL8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn4Q3UWL8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn4Q3UWL8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn4Q3UWL8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn4Q3UWL8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.5
Pfdn4Q3UWL8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn4Q3UWL8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 Spcs1-204ENSMUST00000226782 949 ntBASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn4Q3UWL8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn4Q3UWL8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pfdn4Q3UWL8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pfdn4Q3UWL8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pfdn4Q3UWL8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pfdn4Q3UWL8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pfdn4Q3UWL8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms