Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nlrc4Q3UP24 Gm12933-201ENSMUST00000120203 872 ntBASIC19.68■□□□□ 0.74
Nlrc4Q3UP24 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nlrc4Q3UP24 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nlrc4Q3UP24 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nlrc4Q3UP24 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nlrc4Q3UP24 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nlrc4Q3UP24 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nlrc4Q3UP24 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nlrc4Q3UP24 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nlrc4Q3UP24 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Gm13148-201ENSMUST00000118892 745 ntBASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nlrc4Q3UP24 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nlrc4Q3UP24 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.65■□□□□ 0.74
Nlrc4Q3UP24 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.64■□□□□ 0.74
Nlrc4Q3UP24 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nlrc4Q3UP24 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nlrc4Q3UP24 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.64■□□□□ 0.74
Nlrc4Q3UP24 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Nlrc4Q3UP24 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nlrc4Q3UP24 Gm7290-201ENSMUST00000104990 617 ntBASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 Gm12918-201ENSMUST00000120234 636 ntBASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 Gm15710-201ENSMUST00000121821 636 ntBASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 Gm5075-201ENSMUST00000196916 622 ntBASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nlrc4Q3UP24 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Mir5133-201ENSMUST00000174955 77 ntBASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Gm29257-201ENSMUST00000186115 639 ntBASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nlrc4Q3UP24 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nlrc4Q3UP24 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Nlrc4Q3UP24 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms