Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Gm18115-201ENSMUST00000221209 621 ntBASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Spg11Q3UHA3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Gm37292-201ENSMUST00000192062 758 ntBASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Spg11Q3UHA3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Spg11Q3UHA3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Spg11Q3UHA3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Spg11Q3UHA3 Gm24589-201ENSMUST00000116692 94 ntBASIC17.34■□□□□ 0.37
Spg11Q3UHA3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Spg11Q3UHA3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.34■□□□□ 0.37
Spg11Q3UHA3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Spg11Q3UHA3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Spg11Q3UHA3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Spg11Q3UHA3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Spg11Q3UHA3 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.34■□□□□ 0.37
Spg11Q3UHA3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Spg11Q3UHA3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Spg11Q3UHA3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Spg11Q3UHA3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Spg11Q3UHA3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Spg11Q3UHA3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Spg11Q3UHA3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Spg11Q3UHA3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Spg11Q3UHA3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Spg11Q3UHA3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Spg11Q3UHA3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 Gm18958-201ENSMUST00000174258 762 ntBASIC17.31■□□□□ 0.36
Spg11Q3UHA3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.31■□□□□ 0.36
Spg11Q3UHA3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Spg11Q3UHA3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Gm34391-201ENSMUST00000203706 907 ntBASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg11Q3UHA3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Gm27525-201ENSMUST00000184465 107 ntBASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg11Q3UHA3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Gm6623-201ENSMUST00000173570 544 ntBASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Gm7063-201ENSMUST00000186840 981 ntBASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms