Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ptchd3Q0EEE2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptchd3Q0EEE2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ptchd3Q0EEE2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ptchd3Q0EEE2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptchd3Q0EEE2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptchd3Q0EEE2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptchd3Q0EEE2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptchd3Q0EEE2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.96■□□□□ 0.46
Ptchd3Q0EEE2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ptchd3Q0EEE2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ptchd3Q0EEE2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Gm27454-201ENSMUST00000185090 204 ntBASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Ptchd3Q0EEE2 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.94■□□□□ 0.46
Ptchd3Q0EEE2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ptchd3Q0EEE2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ptchd3Q0EEE2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ptchd3Q0EEE2 Gm12821-201ENSMUST00000120022 600 ntBASIC17.94■□□□□ 0.46
Ptchd3Q0EEE2 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.94■□□□□ 0.46
Ptchd3Q0EEE2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms