Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf1Q07802 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf1Q07802 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf1Q07802 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.88■□□□□ 0.61
Ebf1Q07802 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf1Q07802 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf1Q07802 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.88■□□□□ 0.61
Ebf1Q07802 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ebf1Q07802 Mir6982-201ENSMUST00000184354 68 ntBASIC18.88■□□□□ 0.61
Ebf1Q07802 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.88■□□□□ 0.61
Ebf1Q07802 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.88■□□□□ 0.61
Ebf1Q07802 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf1Q07802 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.88■□□□□ 0.61
Ebf1Q07802 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf1Q07802 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ebf1Q07802 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf1Q07802 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf1Q07802 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf1Q07802 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.87■□□□□ 0.61
Ebf1Q07802 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf1Q07802 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf1Q07802 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf1Q07802 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf1Q07802 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf1Q07802 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf1Q07802 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf1Q07802 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.86■□□□□ 0.61
Ebf1Q07802 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf1Q07802 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf1Q07802 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf1Q07802 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf1Q07802 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf1Q07802 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf1Q07802 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf1Q07802 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ebf1Q07802 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Ebf1Q07802 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ebf1Q07802 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf1Q07802 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf1Q07802 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.85■□□□□ 0.61
Ebf1Q07802 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf1Q07802 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
Ebf1Q07802 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.85■□□□□ 0.61
Ebf1Q07802 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.85■□□□□ 0.61
Ebf1Q07802 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf1Q07802 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.85■□□□□ 0.61
Ebf1Q07802 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf1Q07802 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf1Q07802 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf1Q07802 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf1Q07802 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf1Q07802 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.84■□□□□ 0.61
Ebf1Q07802 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf1Q07802 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf1Q07802 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ebf1Q07802 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf1Q07802 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Ebf1Q07802 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ebf1Q07802 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ebf1Q07802 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ebf1Q07802 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf1Q07802 Gm12896-201ENSMUST00000118430 226 ntBASIC18.83■□□□□ 0.6
Ebf1Q07802 Gm27275-201ENSMUST00000184318 272 ntBASIC18.83■□□□□ 0.6
Ebf1Q07802 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf1Q07802 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf1Q07802 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf1Q07802 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf1Q07802 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf1Q07802 Gm5643-201ENSMUST00000117081 966 ntBASIC18.82■□□□□ 0.6
Ebf1Q07802 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.82■□□□□ 0.6
Ebf1Q07802 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ebf1Q07802 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf1Q07802 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Ebf1Q07802 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf1Q07802 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf1Q07802 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ebf1Q07802 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Ebf1Q07802 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Gm7977-201ENSMUST00000193787 748 ntBASIC18.81■□□□□ 0.6
Ebf1Q07802 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ebf1Q07802 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.81■□□□□ 0.6
Ebf1Q07802 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.81■□□□□ 0.6
Ebf1Q07802 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf1Q07802 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf1Q07802 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf1Q07802 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf1Q07802 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf1Q07802 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf1Q07802 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf1Q07802 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms