Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hspg2Q05793 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Hspg2Q05793 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.94□□□□□ -0.18
Hspg2Q05793 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.94□□□□□ -0.18
Hspg2Q05793 Gm44549-201ENSMUST00000208351 577 ntBASIC13.94□□□□□ -0.18
Hspg2Q05793 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hspg2Q05793 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hspg2Q05793 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hspg2Q05793 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Hspg2Q05793 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.93□□□□□ -0.18
Hspg2Q05793 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hspg2Q05793 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Hspg2Q05793 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.93□□□□□ -0.18
Hspg2Q05793 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.93□□□□□ -0.18
Hspg2Q05793 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hspg2Q05793 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hspg2Q05793 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hspg2Q05793 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.92□□□□□ -0.18
Hspg2Q05793 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hspg2Q05793 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Hspg2Q05793 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.92□□□□□ -0.18
Hspg2Q05793 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.92□□□□□ -0.18
Hspg2Q05793 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hspg2Q05793 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hspg2Q05793 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hspg2Q05793 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hspg2Q05793 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hspg2Q05793 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hspg2Q05793 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hspg2Q05793 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hspg2Q05793 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hspg2Q05793 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.91□□□□□ -0.18
Hspg2Q05793 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.91□□□□□ -0.18
Hspg2Q05793 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.91□□□□□ -0.18
Hspg2Q05793 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hspg2Q05793 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hspg2Q05793 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hspg2Q05793 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.91□□□□□ -0.18
Hspg2Q05793 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hspg2Q05793 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.91□□□□□ -0.18
Hspg2Q05793 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hspg2Q05793 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.91□□□□□ -0.18
Hspg2Q05793 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Hspg2Q05793 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hspg2Q05793 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hspg2Q05793 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.9□□□□□ -0.18
Hspg2Q05793 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hspg2Q05793 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Hspg2Q05793 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hspg2Q05793 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.9□□□□□ -0.18
Hspg2Q05793 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hspg2Q05793 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Hspg2Q05793 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hspg2Q05793 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hspg2Q05793 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Hspg2Q05793 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hspg2Q05793 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hspg2Q05793 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hspg2Q05793 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hspg2Q05793 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hspg2Q05793 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hspg2Q05793 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Hspg2Q05793 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hspg2Q05793 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hspg2Q05793 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Hspg2Q05793 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hspg2Q05793 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.89□□□□□ -0.19
Hspg2Q05793 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
Hspg2Q05793 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms