Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad4P97471 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smad4P97471 Gm14859-201ENSMUST00000117752 357 ntBASIC18.81■□□□□ 0.6
Smad4P97471 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.81■□□□□ 0.6
Smad4P97471 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smad4P97471 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad4P97471 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smad4P97471 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smad4P97471 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.81■□□□□ 0.6
Smad4P97471 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smad4P97471 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad4P97471 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.81■□□□□ 0.6
Smad4P97471 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad4P97471 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.8■□□□□ 0.6
Smad4P97471 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad4P97471 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad4P97471 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smad4P97471 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.8■□□□□ 0.6
Smad4P97471 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Smad4P97471 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.8■□□□□ 0.6
Smad4P97471 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.8■□□□□ 0.6
Smad4P97471 Gm37292-201ENSMUST00000192062 758 ntBASIC18.8■□□□□ 0.6
Smad4P97471 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smad4P97471 Gm18032-201ENSMUST00000222541 538 ntBASIC18.8■□□□□ 0.6
Smad4P97471 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad4P97471 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smad4P97471 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Smad4P97471 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smad4P97471 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.79■□□□□ 0.6
Smad4P97471 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad4P97471 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Smad4P97471 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smad4P97471 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.78■□□□□ 0.6
Smad4P97471 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smad4P97471 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smad4P97471 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.78■□□□□ 0.6
Smad4P97471 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.78■□□□□ 0.6
Smad4P97471 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smad4P97471 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smad4P97471 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smad4P97471 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smad4P97471 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smad4P97471 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smad4P97471 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smad4P97471 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smad4P97471 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smad4P97471 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smad4P97471 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.77■□□□□ 0.6
Smad4P97471 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smad4P97471 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smad4P97471 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smad4P97471 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.77■□□□□ 0.6
Smad4P97471 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Smad4P97471 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smad4P97471 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smad4P97471 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smad4P97471 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.77■□□□□ 0.6
Smad4P97471 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smad4P97471 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smad4P97471 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.76■□□□□ 0.59
Smad4P97471 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smad4P97471 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Smad4P97471 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad4P97471 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Smad4P97471 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad4P97471 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad4P97471 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad4P97471 Ank2-226ENSMUST00000189368 339 ntBASIC18.76■□□□□ 0.59
Smad4P97471 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smad4P97471 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad4P97471 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad4P97471 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smad4P97471 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smad4P97471 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.75■□□□□ 0.59
Smad4P97471 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smad4P97471 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smad4P97471 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smad4P97471 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smad4P97471 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smad4P97471 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.75■□□□□ 0.59
Smad4P97471 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.75■□□□□ 0.59
Smad4P97471 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Smad4P97471 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smad4P97471 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smad4P97471 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smad4P97471 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smad4P97471 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smad4P97471 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms