Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shox2P70390 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shox2P70390 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shox2P70390 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Shox2P70390 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shox2P70390 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shox2P70390 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Shox2P70390 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shox2P70390 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Shox2P70390 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shox2P70390 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.52■□□□□ 0.56
Shox2P70390 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Shox2P70390 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shox2P70390 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shox2P70390 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shox2P70390 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shox2P70390 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shox2P70390 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shox2P70390 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Shox2P70390 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shox2P70390 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shox2P70390 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shox2P70390 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shox2P70390 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shox2P70390 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shox2P70390 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shox2P70390 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shox2P70390 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.51■□□□□ 0.55
Shox2P70390 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shox2P70390 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Shox2P70390 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shox2P70390 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.5■□□□□ 0.55
Shox2P70390 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shox2P70390 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shox2P70390 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shox2P70390 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shox2P70390 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shox2P70390 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shox2P70390 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shox2P70390 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Shox2P70390 Gm11175-201ENSMUST00000116172 543 ntBASIC18.49■□□□□ 0.55
Shox2P70390 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.49■□□□□ 0.55
Shox2P70390 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.49■□□□□ 0.55
Shox2P70390 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.49■□□□□ 0.55
Shox2P70390 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.49■□□□□ 0.55
Shox2P70390 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shox2P70390 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shox2P70390 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Shox2P70390 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shox2P70390 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.49■□□□□ 0.55
Shox2P70390 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Shox2P70390 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shox2P70390 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.49■□□□□ 0.55
Shox2P70390 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shox2P70390 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shox2P70390 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Shox2P70390 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.48■□□□□ 0.55
Shox2P70390 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.48■□□□□ 0.55
Shox2P70390 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shox2P70390 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shox2P70390 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Shox2P70390 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Shox2P70390 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shox2P70390 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shox2P70390 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shox2P70390 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shox2P70390 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shox2P70390 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shox2P70390 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shox2P70390 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shox2P70390 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shox2P70390 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shox2P70390 Gm40881-201ENSMUST00000223397 166 ntBASIC18.47■□□□□ 0.55
Shox2P70390 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shox2P70390 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shox2P70390 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shox2P70390 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Shox2P70390 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shox2P70390 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shox2P70390 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Shox2P70390 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Shox2P70390 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shox2P70390 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Shox2P70390 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shox2P70390 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Shox2P70390 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.46■□□□□ 0.55
Shox2P70390 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shox2P70390 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shox2P70390 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Shox2P70390 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shox2P70390 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shox2P70390 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shox2P70390 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Shox2P70390 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shox2P70390 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shox2P70390 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Shox2P70390 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shox2P70390 Gm13238-201ENSMUST00000117655 780 ntBASIC18.45■□□□□ 0.54
Shox2P70390 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.45■□□□□ 0.54
Shox2P70390 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms