Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Rab3c-203ENSMUST00000224180 967 ntBASIC18.36■□□□□ 0.53
Lhx1P63006 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx1P63006 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx1P63006 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Lhx1P63006 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx1P63006 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx1P63006 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx1P63006 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Lhx1P63006 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx1P63006 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Lhx1P63006 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx1P63006 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx1P63006 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.35■□□□□ 0.53
Lhx1P63006 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.35■□□□□ 0.53
Lhx1P63006 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lhx1P63006 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx1P63006 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx1P63006 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx1P63006 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx1P63006 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Lhx1P63006 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx1P63006 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx1P63006 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.34■□□□□ 0.53
Lhx1P63006 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.34■□□□□ 0.53
Lhx1P63006 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Lhx1P63006 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.34■□□□□ 0.53
Lhx1P63006 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.34■□□□□ 0.53
Lhx1P63006 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Lhx1P63006 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx1P63006 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Lhx1P63006 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lhx1P63006 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lhx1P63006 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lhx1P63006 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lhx1P63006 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Lhx1P63006 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Lhx1P63006 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.33■□□□□ 0.52
Lhx1P63006 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.33■□□□□ 0.52
Lhx1P63006 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx1P63006 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Lhx1P63006 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Lhx1P63006 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx1P63006 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.33■□□□□ 0.52
Lhx1P63006 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx1P63006 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.33■□□□□ 0.52
Lhx1P63006 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx1P63006 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Lhx1P63006 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.32■□□□□ 0.52
Lhx1P63006 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lhx1P63006 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx1P63006 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.32■□□□□ 0.52
Lhx1P63006 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Lhx1P63006 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.31■□□□□ 0.52
Lhx1P63006 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.31■□□□□ 0.52
Lhx1P63006 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.31■□□□□ 0.52
Lhx1P63006 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.31■□□□□ 0.52
Lhx1P63006 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.31■□□□□ 0.52
Lhx1P63006 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx1P63006 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx1P63006 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Lhx1P63006 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx1P63006 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx1P63006 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx1P63006 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Lhx1P63006 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.3■□□□□ 0.52
Lhx1P63006 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx1P63006 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.3■□□□□ 0.52
Lhx1P63006 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx1P63006 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx1P63006 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx1P63006 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx1P63006 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx1P63006 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx1P63006 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Lhx1P63006 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.29■□□□□ 0.52
Lhx1P63006 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lhx1P63006 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lhx1P63006 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms