Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm3P62311 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm3P62311 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm3P62311 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm3P62311 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm3P62311 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm3P62311 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.08■□□□□ 0.32
Lsm3P62311 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm3P62311 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.08■□□□□ 0.32
Lsm3P62311 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.07■□□□□ 0.32
Lsm3P62311 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Lsm3P62311 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.07■□□□□ 0.32
Lsm3P62311 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.07■□□□□ 0.32
Lsm3P62311 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Lsm3P62311 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Lsm3P62311 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.07■□□□□ 0.32
Lsm3P62311 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm3P62311 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.06■□□□□ 0.32
Lsm3P62311 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.06■□□□□ 0.32
Lsm3P62311 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm3P62311 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lsm3P62311 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lsm3P62311 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm3P62311 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm3P62311 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm3P62311 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Lsm3P62311 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lsm3P62311 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.04■□□□□ 0.32
Lsm3P62311 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm3P62311 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm3P62311 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm3P62311 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm3P62311 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Lsm3P62311 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm3P62311 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm3P62311 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm3P62311 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm3P62311 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Lsm3P62311 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.03■□□□□ 0.32
Lsm3P62311 Gm10420-201ENSMUST00000121713 882 ntBASIC17.03■□□□□ 0.32
Lsm3P62311 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.03■□□□□ 0.32
Lsm3P62311 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
Lsm3P62311 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm3P62311 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Lsm3P62311 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Lsm3P62311 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Lsm3P62311 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms