Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SmoP56726 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SmoP56726 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.81■□□□□ 0.6
SmoP56726 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.81■□□□□ 0.6
SmoP56726 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SmoP56726 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SmoP56726 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SmoP56726 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SmoP56726 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SmoP56726 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.81■□□□□ 0.6
SmoP56726 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SmoP56726 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SmoP56726 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SmoP56726 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SmoP56726 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SmoP56726 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SmoP56726 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.8■□□□□ 0.6
SmoP56726 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SmoP56726 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SmoP56726 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SmoP56726 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SmoP56726 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SmoP56726 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.79■□□□□ 0.6
SmoP56726 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
SmoP56726 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SmoP56726 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SmoP56726 Rab3c-203ENSMUST00000224180 967 ntBASIC18.79■□□□□ 0.6
SmoP56726 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SmoP56726 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.79■□□□□ 0.6
SmoP56726 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SmoP56726 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SmoP56726 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SmoP56726 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SmoP56726 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SmoP56726 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SmoP56726 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SmoP56726 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SmoP56726 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.78■□□□□ 0.6
SmoP56726 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.78■□□□□ 0.6
SmoP56726 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SmoP56726 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.78■□□□□ 0.6
SmoP56726 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.78■□□□□ 0.6
SmoP56726 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.78■□□□□ 0.6
SmoP56726 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.78■□□□□ 0.6
SmoP56726 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.78■□□□□ 0.6
SmoP56726 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SmoP56726 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SmoP56726 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SmoP56726 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SmoP56726 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SmoP56726 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.77■□□□□ 0.6
SmoP56726 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SmoP56726 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SmoP56726 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SmoP56726 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SmoP56726 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
SmoP56726 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SmoP56726 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SmoP56726 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SmoP56726 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.77■□□□□ 0.6
SmoP56726 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.77■□□□□ 0.6
SmoP56726 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.77■□□□□ 0.6
SmoP56726 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SmoP56726 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SmoP56726 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SmoP56726 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SmoP56726 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SmoP56726 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SmoP56726 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SmoP56726 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SmoP56726 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SmoP56726 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SmoP56726 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SmoP56726 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SmoP56726 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SmoP56726 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SmoP56726 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SmoP56726 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SmoP56726 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SmoP56726 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.76■□□□□ 0.59
SmoP56726 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SmoP56726 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SmoP56726 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SmoP56726 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SmoP56726 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SmoP56726 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SmoP56726 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SmoP56726 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SmoP56726 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SmoP56726 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SmoP56726 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SmoP56726 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.75■□□□□ 0.59
SmoP56726 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SmoP56726 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SmoP56726 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SmoP56726 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SmoP56726 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SmoP56726 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SmoP56726 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SmoP56726 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms