Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Nub1P54729 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nub1P54729 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nub1P54729 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nub1P54729 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nub1P54729 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nub1P54729 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nub1P54729 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.05■□□□□ 0.8
Nub1P54729 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nub1P54729 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nub1P54729 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nub1P54729 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nub1P54729 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nub1P54729 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nub1P54729 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nub1P54729 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nub1P54729 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nub1P54729 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.04■□□□□ 0.8
Nub1P54729 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.04■□□□□ 0.8
Nub1P54729 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nub1P54729 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nub1P54729 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.03■□□□□ 0.8
Nub1P54729 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.03■□□□□ 0.8
Nub1P54729 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.03■□□□□ 0.8
Nub1P54729 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.03■□□□□ 0.8
Nub1P54729 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nub1P54729 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.02■□□□□ 0.8
Nub1P54729 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nub1P54729 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.02■□□□□ 0.8
Nub1P54729 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nub1P54729 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nub1P54729 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nub1P54729 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nub1P54729 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nub1P54729 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nub1P54729 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nub1P54729 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Nub1P54729 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nub1P54729 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.02■□□□□ 0.8
Nub1P54729 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nub1P54729 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nub1P54729 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Nub1P54729 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nub1P54729 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nub1P54729 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nub1P54729 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nub1P54729 Gm6420-201ENSMUST00000193885 723 ntBASIC20.01■□□□□ 0.79
Nub1P54729 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nub1P54729 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nub1P54729 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nub1P54729 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nub1P54729 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nub1P54729 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nub1P54729 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nub1P54729 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Nub1P54729 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 BC021767-201ENSMUST00000126387 1716 ntBASIC20■□□□□ 0.79
Nub1P54729 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Nub1P54729 Gm27405-201ENSMUST00000184201 112 ntBASIC20■□□□□ 0.79
Nub1P54729 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20■□□□□ 0.79
Nub1P54729 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nub1P54729 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nub1P54729 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nub1P54729 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nub1P54729 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nub1P54729 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nub1P54729 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.99■□□□□ 0.79
Nub1P54729 Nespas-201ENSMUST00000143738 1083 ntBASIC19.99■□□□□ 0.79
Nub1P54729 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.99■□□□□ 0.79
Nub1P54729 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nub1P54729 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nub1P54729 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nub1P54729 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms