Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RoraP51448 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.61■□□□□ 0.41
RoraP51448 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RoraP51448 Gm20760-201ENSMUST00000179197 648 ntBASIC17.61■□□□□ 0.41
RoraP51448 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RoraP51448 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RoraP51448 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RoraP51448 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RoraP51448 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RoraP51448 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RoraP51448 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RoraP51448 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RoraP51448 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RoraP51448 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RoraP51448 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RoraP51448 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RoraP51448 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.6■□□□□ 0.41
RoraP51448 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RoraP51448 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.6■□□□□ 0.41
RoraP51448 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RoraP51448 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RoraP51448 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RoraP51448 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.6■□□□□ 0.41
RoraP51448 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RoraP51448 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RoraP51448 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RoraP51448 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.6■□□□□ 0.41
RoraP51448 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RoraP51448 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RoraP51448 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RoraP51448 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RoraP51448 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RoraP51448 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RoraP51448 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RoraP51448 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RoraP51448 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RoraP51448 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RoraP51448 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.59■□□□□ 0.41
RoraP51448 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.59■□□□□ 0.41
RoraP51448 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RoraP51448 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.59■□□□□ 0.41
RoraP51448 Rab3c-203ENSMUST00000224180 967 ntBASIC17.59■□□□□ 0.41
RoraP51448 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RoraP51448 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.59■□□□□ 0.41
RoraP51448 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RoraP51448 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RoraP51448 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RoraP51448 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.58■□□□□ 0.41
RoraP51448 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RoraP51448 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RoraP51448 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RoraP51448 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RoraP51448 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RoraP51448 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RoraP51448 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
RoraP51448 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.58■□□□□ 0.4
RoraP51448 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.58■□□□□ 0.4
RoraP51448 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.58■□□□□ 0.4
RoraP51448 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RoraP51448 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RoraP51448 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RoraP51448 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RoraP51448 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RoraP51448 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RoraP51448 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.58■□□□□ 0.4
RoraP51448 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RoraP51448 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RoraP51448 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RoraP51448 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RoraP51448 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RoraP51448 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.57■□□□□ 0.4
RoraP51448 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RoraP51448 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RoraP51448 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RoraP51448 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RoraP51448 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.57■□□□□ 0.4
RoraP51448 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RoraP51448 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.57■□□□□ 0.4
RoraP51448 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RoraP51448 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RoraP51448 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RoraP51448 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RoraP51448 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RoraP51448 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
RoraP51448 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.56■□□□□ 0.4
RoraP51448 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Golph3-202ENSMUST00000226517 2359 ntBASIC17.56■□□□□ 0.4
RoraP51448 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RoraP51448 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RoraP51448 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RoraP51448 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms