Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.85■□□□□ 0.29
Rfx3P48381 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx3P48381 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx3P48381 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx3P48381 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx3P48381 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx3P48381 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx3P48381 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx3P48381 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.84■□□□□ 0.29
Rfx3P48381 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx3P48381 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfx3P48381 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx3P48381 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx3P48381 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx3P48381 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rfx3P48381 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx3P48381 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx3P48381 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx3P48381 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfx3P48381 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Rfx3P48381 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx3P48381 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rfx3P48381 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfx3P48381 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx3P48381 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx3P48381 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx3P48381 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx3P48381 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx3P48381 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rfx3P48381 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rfx3P48381 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx3P48381 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx3P48381 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx3P48381 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx3P48381 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.82■□□□□ 0.28
Rfx3P48381 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.82■□□□□ 0.28
Rfx3P48381 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.82■□□□□ 0.28
Rfx3P48381 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx3P48381 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.81■□□□□ 0.28
Rfx3P48381 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rfx3P48381 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfx3P48381 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rfx3P48381 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx3P48381 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfx3P48381 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx3P48381 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rfx3P48381 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx3P48381 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx3P48381 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rfx3P48381 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx3P48381 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.8■□□□□ 0.28
Rfx3P48381 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx3P48381 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.8■□□□□ 0.28
Rfx3P48381 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Rfx3P48381 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx3P48381 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rfx3P48381 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx3P48381 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.8■□□□□ 0.28
Rfx3P48381 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfx3P48381 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Rfx3P48381 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx3P48381 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx3P48381 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Rfx3P48381 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx3P48381 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rfx3P48381 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx3P48381 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx3P48381 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rfx3P48381 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx3P48381 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx3P48381 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rfx3P48381 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Rfx3P48381 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx3P48381 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rfx3P48381 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx3P48381 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx3P48381 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms