Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Vps4bP46467 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps4bP46467 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.92■□□□□ 0.62
Vps4bP46467 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
Vps4bP46467 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vps4bP46467 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps4bP46467 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps4bP46467 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps4bP46467 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps4bP46467 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps4bP46467 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vps4bP46467 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps4bP46467 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Vps4bP46467 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps4bP46467 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vps4bP46467 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps4bP46467 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps4bP46467 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps4bP46467 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps4bP46467 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps4bP46467 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vps4bP46467 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps4bP46467 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps4bP46467 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps4bP46467 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
Vps4bP46467 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Vps4bP46467 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps4bP46467 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps4bP46467 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps4bP46467 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps4bP46467 Gm29257-201ENSMUST00000186115 639 ntBASIC18.9■□□□□ 0.62
Vps4bP46467 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps4bP46467 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps4bP46467 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps4bP46467 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps4bP46467 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.9■□□□□ 0.62
Vps4bP46467 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vps4bP46467 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vps4bP46467 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vps4bP46467 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps4bP46467 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps4bP46467 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps4bP46467 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps4bP46467 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Vps4bP46467 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps4bP46467 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps4bP46467 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps4bP46467 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps4bP46467 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps4bP46467 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps4bP46467 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps4bP46467 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps4bP46467 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps4bP46467 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Vps4bP46467 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps4bP46467 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps4bP46467 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps4bP46467 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vps4bP46467 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Vps4bP46467 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps4bP46467 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.88■□□□□ 0.61
Vps4bP46467 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps4bP46467 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps4bP46467 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps4bP46467 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Vps4bP46467 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps4bP46467 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps4bP46467 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps4bP46467 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.87■□□□□ 0.61
Vps4bP46467 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps4bP46467 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.87■□□□□ 0.61
Vps4bP46467 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps4bP46467 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Vps4bP46467 Gm40848-201ENSMUST00000221998 324 ntBASIC18.87■□□□□ 0.61
Vps4bP46467 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps4bP46467 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps4bP46467 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4bP46467 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Vps4bP46467 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4bP46467 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4bP46467 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4bP46467 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.86■□□□□ 0.61
Vps4bP46467 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Vps4bP46467 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.86■□□□□ 0.61
Vps4bP46467 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.86■□□□□ 0.61
Vps4bP46467 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Vps4bP46467 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.86■□□□□ 0.61
Vps4bP46467 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4bP46467 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4bP46467 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4bP46467 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4bP46467 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Vps4bP46467 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.86■□□□□ 0.61
Vps4bP46467 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms