Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl12P40224 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cxcl12P40224 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cxcl12P40224 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cxcl12P40224 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cxcl12P40224 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cxcl12P40224 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cxcl12P40224 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.36■□□□□ 0.69
Cxcl12P40224 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Cxcl12P40224 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cxcl12P40224 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cxcl12P40224 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cxcl12P40224 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cxcl12P40224 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.36■□□□□ 0.69
Cxcl12P40224 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cxcl12P40224 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.36■□□□□ 0.69
Cxcl12P40224 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cxcl12P40224 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cxcl12P40224 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cxcl12P40224 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.35■□□□□ 0.69
Cxcl12P40224 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.35■□□□□ 0.69
Cxcl12P40224 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cxcl12P40224 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cxcl12P40224 Mtag2-201ENSMUST00000058665 714 ntBASIC19.35■□□□□ 0.69
Cxcl12P40224 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Cxcl12P40224 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cxcl12P40224 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cxcl12P40224 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cxcl12P40224 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cxcl12P40224 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cxcl12P40224 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cxcl12P40224 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.34■□□□□ 0.69
Cxcl12P40224 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cxcl12P40224 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cxcl12P40224 Gm10517-202ENSMUST00000192970 758 ntBASIC19.34■□□□□ 0.69
Cxcl12P40224 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.34■□□□□ 0.69
Cxcl12P40224 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cxcl12P40224 Odf3b-204ENSMUST00000227834 930 ntBASIC19.34■□□□□ 0.69
Cxcl12P40224 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cxcl12P40224 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cxcl12P40224 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cxcl12P40224 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cxcl12P40224 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cxcl12P40224 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.33■□□□□ 0.69
Cxcl12P40224 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cxcl12P40224 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.33■□□□□ 0.69
Cxcl12P40224 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.33■□□□□ 0.69
Cxcl12P40224 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cxcl12P40224 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Cxcl12P40224 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.33■□□□□ 0.68
Cxcl12P40224 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cxcl12P40224 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cxcl12P40224 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cxcl12P40224 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cxcl12P40224 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cxcl12P40224 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cxcl12P40224 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl12P40224 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl12P40224 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl12P40224 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl12P40224 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cxcl12P40224 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.32■□□□□ 0.68
Cxcl12P40224 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl12P40224 Gm10138-203ENSMUST00000206952 366 ntBASIC19.32■□□□□ 0.68
Cxcl12P40224 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Cxcl12P40224 Timm23-208ENSMUST00000226683 750 ntBASIC19.32■□□□□ 0.68
Cxcl12P40224 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl12P40224 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl12P40224 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cxcl12P40224 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl12P40224 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl12P40224 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Cxcl12P40224 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl12P40224 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cxcl12P40224 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.31■□□□□ 0.68
Cxcl12P40224 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cxcl12P40224 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Cxcl12P40224 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.31■□□□□ 0.68
Cxcl12P40224 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cxcl12P40224 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cxcl12P40224 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cxcl12P40224 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.31■□□□□ 0.68
Cxcl12P40224 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.31■□□□□ 0.68
Cxcl12P40224 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cxcl12P40224 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cxcl12P40224 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cxcl12P40224 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cxcl12P40224 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cxcl12P40224 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cxcl12P40224 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Cxcl12P40224 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.3■□□□□ 0.68
Cxcl12P40224 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cxcl12P40224 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cxcl12P40224 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cxcl12P40224 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cxcl12P40224 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cxcl12P40224 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Cxcl12P40224 Gm18025-201ENSMUST00000221733 862 ntBASIC19.29■□□□□ 0.68
Cxcl12P40224 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.29■□□□□ 0.68
Cxcl12P40224 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms